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An Analysis and Comparison of Quality Index Using Clustering Techniques for Spot Detection in Noisy Microarray Images
A. Sri Nagesh, G.P.Saradhi Varma, A.Govardhan, B.Raveendra Babu
Pages - 504 - 511 | Revised - 01-09-2011 | Published - 05-10-2011
Published in International Journal of Image Processing (IJIP)
MORE INFORMATION
KEYWORDS
Microarray Image, Genes, Spot Segmentation, Morphological Operator, Fuzzy K-Means, Fuzzy C-means, Enhanced fuzzy C-means Clustering (EFCM).
ABSTRACT
In this paper, the proposed approach consists of mainly three important steps: preprocessing, gridding and segmentation of micro array images. Initially, the microarray image is preprocessed using filtering and morphological operators and it is given for gridding to fit a grid on the images using hill-climbing algorithm. Subsequently, the segmentation is carried out using the fuzzy c-means clustering. Initially the enhanced fuzzy c-means clustering algorithm (EFCMC) is implemented to effectively clustering the image whether the image may be affected by the noises or not. Then, the EFCM method was employed the real microarray images and noisy microarray images in order to investigate the efficiency of the segmentation. Finally, the segmentation efficiency of the proposed approach was compared with the various algorithms in terms of quality index and the obtained results ensures that the performance efficiency of the proposed algorithm was improved in term of quality index rather than other algorithms.
A.Sri Nagesh, Dr G.P.S.Varma, Dr.A.Govardhan “An Improved Iterative Watershed and Morphological Transformation Techniques for Segmentation of Microarray Images” IJCA Special Issue on “Computer Aided Soft Computing Techniques for Imaging and Biomedical Applications” CASCT, 2010. | |
A.Sri Nagesh, Dr.A.Govardhan,Dr G.P.S.Varma, Dr G.S.Prasad, ”An Automated Histogram Equalized Fuzzy Clustering based Approach for the Segmentation of Microarray images.”ANU Journal of Engineering and Technology, pp 42-48 volume 2, Issue 2 December 2010, ISSN: 0976-3414. | |
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Mr. A. Sri Nagesh
- India
asrinagesh@gmail.com
Mr. G.P.Saradhi Varma
- India
Mr. A.Govardhan
- India
Mr. B.Raveendra Babu
- India
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